Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNVFVFSRLAPEHLERLQCQFNVRVLEPKQGDIDAQYAAALPDTHGMIGVGRPLGARQLEQAKQLEVISSVSVGYDNYDLDYLNRRGIALTNTPDVLTETTADLGFALLISAARRVAELDAWVKAGNWKRTVDAPQF-GTDVHGKKLGILGLGRIGAAIARRGRFGFGMQVLYH-GNNRKPELEQELGARFLGFDELLGEADFVCVVVPLGAQTRQLIGARELGLMKPSAILVNVARGQVVDEAALVAALREKRILGAGLDVYEKEPLA--------ESPLFALDNVVTLPHIGSATHETRRAMAERALQNFEAALRGERPLDLVNPQVWRRG |
| 4NU6 Chain:B ((62-326)) | ------------------------------------------------------------LQACPELRVIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGW--QPRFYGTGLDNATVGFLGMGAIGLAMADRLQ-GWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVKLEIERCAAQNILQALAGERPINAVN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NU6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156790 for 1982 contacts (-79.1/contact) +
2D Compatibility (PS) -28228 + (NN) -15764 + (LL) 4760
1D Compatibility (HY) -20000 + (ID) 5100
Total energy: -221122.0 ( -111.57 by residue)
QMean score : 0.487
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