Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSTIHPLPSFGLGTFRLTGQVVVDSVRSALELGYRAIDTAQIYGNEADIGRAIA----ESGVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPAPGNGVELGEYMAA---LAEAKSLGLTRRIGVSNF------NIELTRQAIAAVGAGEISTNQIELSPYLQNRALTAYLEEQGIAVTSYMTLAYGK--VLKDPTLAGIAARHRATVAQVALAWAMQLGYAVIPSSTRRENLASNLLARDLRLDAEDMARIAGLERNGREVSPQGLAPAWD
1VP5 Chain:B ((26-275))-------MPILGYGVFQIPPEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVGYESTKKAFEKSLKKLQLEYIDLYLIHQP-------FGDVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAV-------NQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAEGRKNIFQNGVLRSIAEKYGKTVAQVILRWLTQKGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLD----------------


General information:
TITO was launched using:
RESULT:

Template: 1VP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140447 for 1958 contacts (-71.7/contact) +
2D Compatibility (PS) -25633 + (NN) -11380 + (LL) 748
1D Compatibility (HY) -19600 + (ID) 4550
Total energy: -200862.0 ( -102.59 by residue)
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_1VP5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VP5-query.scw
PDB file : Tito_Scwrl_1VP5.pdb: