Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLLKLLQDGRFHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKIDSLWPVEIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGLAVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMKTATDIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESC--NLWQGAQV-ILSTALSSIEGRVLGVDSRGALRLEVDGVE-QGFSGGELSLRLRQ |
2DKG Chain:B ((36-234)) | --------------------------------------------------------------------------------------------------VIVADKQTMGHGRLNRKWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSI-DGRIKWPNDVLVNYKKIAGVLVEGKGD-----KIVLGIGLNVNNKVPNGA----TSMKLELGSEVP---LLSVF-RSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDG--SFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRF-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121670 for 1502 contacts (-81.0/contact) +
2D Compatibility (PS) -20390 + (NN) -4616 + (LL) 7528
1D Compatibility (HY) -18400 + (ID) 3650
Total energy: -161198.0 ( -107.32 by residue)
QMean score : 0.450
|
|
|