Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------MKKLLPLAVLAALSSVHVASAQAADVSAAVGATGQSGMTYRLGLSWDWDKSWWQTSTGRLT---GYWDAGYTYWEGGDEGAGKHSLSFAPVFVYEFAGDSIKPFIEAGIGVAAFSGTRVGDQNLGSSLNFEDRIGAGLKFANGQSVGVRA-IHYSNAGLKQPNDGIESYSLFYKIPI------------------------------------ |
| 4RWR Chain:A ((55-323)) | VYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTDQVYKSKEELKKQWG----------NNYENNLKKIEEAVSKTAGQVLTYE---GKPISASFFSTSNGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQIFT------VADFQKRLGVKVLADGKVGDIKGRTEGKRVKDVAFQGKTLTGRDVRDKLELRSSDFTWKQEGDKIVVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYYKGVEIKTMNDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7375 for 1005 contacts (-7.3/contact) +
2D Compatibility (PS) -16091 + (NN) -4022 + (LL) 1672
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -31416.0 ( -31.26 by residue)
QMean score : 0.016
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