Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEHIVNVTDASFEQDVLKADGPVLVDYWAEWCG-PCKMIAPVLDEVARDYQGKLKVCKLNIDENQDTPPKYGVRGIPTLMLFKDGNVEATKVGALSKSQLAAFLDANI
1THO Chain:A ((1-108))
-SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL
General information:
TITO was launched using:
RESULT:
Template:
1THO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71482 for 784 contacts (-91.2/contact) +
2D Compatibility (PS) -11424 + (NN) -1741 + (LL) 208
1D Compatibility (HY) -14800 + (ID) 3850
Total energy: -103089.0 ( -131.49 by residue)
QMean score : 0.752
(partial model without unconserved sides chains):
PDB file :
Tito_1THO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1THO-query.scw
PDB file :
Tito_Scwrl_1THO.pdb
: