Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSFVLLAFTLSLLAGCSSGPRLNTDYTSANQDSRVQFIVLHYTSTDLPHSLGILTHGGVSAHYLIGDDEPAT-----VYRLVDENRRAWHAGVSEWQGRTWLNATSIGIEIVNQGYRDTPQGRVWYPFSEAQIQALIPLLKDIAKRHGITPDRIIGHSDIAPGRKVDPGPLFPWKRLADAGLVPWPKPGELARRLAELNG-QLPDVRWFQQQLARHGYLVPQT-GELEKDTRDVIG-AFQMKYRPARFDGEPDLETAALLLAVPTS---
2BH7 Chain:A ((7-260))
-------------GIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMT---PREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQ
General information:
TITO was launched using:
RESULT:
Template:
2BH7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100287 for 1892 contacts (-53.0/contact) +
2D Compatibility (PS) -26896 + (NN) -21400 + (LL) 1992
1D Compatibility (HY) -15200 + (ID) 5000
Total energy: -166791.0 ( -88.16 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_2BH7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BH7-query.scw
PDB file :
Tito_Scwrl_2BH7.pdb
: