Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------MKLGSSRAGPGRGSAGLLPGVHELPM---GIPAPWGTSPLSFHRKCS--LWAPGRPFLTLVLLVSIKQVTGSLLEETTRKWAQYKQACLRDLLKE-----------PSGIFCNGTFDQYVCWPHSSPGNVSVPCPSYLPWWS-EESSGRAYR-HCLAQGTWQTIENATDIWQDDSECSENHSFKQNVDRYALLSTLQLMYTVGYSFSLISLFLALTLLLFLRKLHCTRNYIHMNLFASFILRTLAVLVKDVVFYNSYSKRP-------DNENGWMSYLSEMSTSCRSVQVLL---HYFVGANYLWLLVE--------------GLYLHTLLEP-TVLPERRLWPRYLLLGWAFPVLFVV--------------------PWGFARAHLENT---GCWTTNGNKKIWWIIRGPMMLCVTVNFFIFLKI--LKLLISKLKAH-------------------QMCFRDYKYRLAKSTLVLIPLLGVHEILFSFI--TDDQVEGFAKLIRLFIQLTLSSFHGFLVALQYGFANGEVKAELRKYWVRFLLARHSGCRACVLGKDFRFLGKCPKKLSEGDGAEKLRKLQPSLNSGRLLHLAMRGLGELGAQPQQDHARWPRGSSLSECSEGDVTMANTMEEILEESEI------------------------------------------------ |
| 2PGG Chain:A ((31-804)) | LLIPKVWVPPEDPLASPSRLAKFLRENGYKVLQPRSLPENEEYETDQILPDLAWMRQIEGAVLKPTLSLPIGDQEYFPKYYPTHRPSKEKPNAYPPDIALLKQMIYLFLQVPEANEGLKDEVTLLTQNIRDKAYGSGTYMGQATRLVAMKEVATGRNPNKDPLKLGYTFESIAQLLDITLPVGPPGEDDKPWVPLTRVPSRMLVLT--GDVDGDFEVEDYLPKINLKSSSGLPYVGRTKGETIGEMIAISNQFLRELSTLLKQGAGTKGSNKKKLLSMLSDYWYLSCGL-LFPKAERYDKSTWLTK---TRNIWSAPSPTHLMISMITWPVMSNSPNNVLNIEGCPSLYKFNPFRGGLNRIVEWILAPEEPKALVYADNIYIVHSNTWYSIDLEKGEANCTRQHMQAAMYYILTRGWSDNGDPMFNQTWATFAMNIAPALVVDSSCLIMNLQIKTYGQGSGNAATFINNHLLSTLVLDQWNLMRQPRPDSEEFKSIEDKLGINFKIERSIDDIRGKLRQLVLLAQPGYLSGGVEPEQSSPTVELDLLGWSATYSKDLGIYVPVLDKERLFCSAAYPKGVGIEQAYKVVRYEALRLVGGWNYPLLNKACKNNAGAARRHLEAKGFPLDEFLAEWSELSEFGEAFEGFN--IKLTVTSESLAELNKPVPPKPPNVNRPVNTGGLKAVSNALKTGRYRNEAGLSGLVLLATARSRLQDAVKAKAEAEKLHKSKPDDPDADWFERSETLSDLLEKADIASKVAHSALVETSDALEAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220104 for 4186 contacts (-52.6/contact) +
2D Compatibility (PS) -56570 + (NN) -5295 + (LL) 384
1D Compatibility (HY) -6400 + (ID) 3600
Total energy: -291585.0 ( -69.66 by residue)
QMean score : 0.252
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