Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEQDKIFTNLSGKETPLLKGAKKRGSWQKTKELLDLGSEKIIDEVRKSGLRGRGGAGFSTGLKWSFMPKNPSKEQPTYLVVNADESEPGTCKDRDILRYEPHKLLEGVLLASRAISASVAYIYIRGEFYNEYLVLKQALEEAYKEGLIGKNACKSSYDLNVFIHRGAGAYICGEETAQLESIEGKKGFPRMKPPFPAGVGLFGCPTTINNVETIAMVPDILYRGGEWFASLGKPNNTGTKIFCVSGHVNNPCNVEEELGIPLRELIEEYAGGVRGGWDNLLAVIPGGSSVSLIPKSICDIIKMDFDSLRAAQSGLGTAAVIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMWRIMKRMVTGNIKHGEIDKLLDLTTQIEGNTICALGDAAAWPIQGLIRHFRHVIEERAITKLSVY |
4ARZ Chain:B ((5-325)) | ---------ATDSKAMVLLMGVRRCGKSSICKVVFHNMQPLDTLYLESTSNPSLEHFSTLIDLAVMELPGQLNYFEPS---------------------YDSERLFKSV-------GALVYVIDSQDEYINAITNLAMIIEYAYKV--------NPSINIEVLIHKVDG---------------------------------------LSEDFKVDAQRDIMQRTGEELLELG-LDGVQVSFYLTSIFDH---SIYEAFSRIVQKLIPELS-----FLENMLDNLIQHSK-------IEKAFLFDVNSKIYVSTDSNPVDIQMYEVCSEFIDVTIDLFDLYKAPRNELQNVSQLANGVIIYLRQ-----------MIRGLALVAIIRPNGT--DMESCLTVADYNIDIFKKGLEDIW------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ARZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57168 for 2406 contacts (-23.8/contact) +
2D Compatibility (PS) -32632 + (NN) -7639 + (LL) 6144
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -105695.0 ( -43.93 by residue)
QMean score : 0.239
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