Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MTRKIILQLLISIVIIFTLASAFVFVVVCINKGKPERKDKLYEIDAAH---------------SSWVQTIAYYLVKPILESALDRYIEKHG--------------------LIEYLKEIIQQKVEKGSINFYE-------------------IIEGSG--SRAFCGQEVVLQMYKISDNLATPLPLPKQTSDVTLVIGQDNQREVGLGVIGMKEGGERVVTINNIANKNEVNFNSYYIKLIEVKDKYPDSVNSMMIFNELINKTGKQVKCGDRVSVKYSLMGHDGEYIIKNQTVQFKVGNKKVPLAMELGVIGMKEGNNRTIISPPELLNVTDDMLIENIDFDEESVSIISLSLDDKQEIAAHHSTVE----------------------------------------- |
| 4D7E Chain:A ((1-413)) | METLLVVGAGPKALAVAAKSHVLRQLGLSAPRVIAVEAHAVGGNWLASGGWTDGRHRLGTSPEKDIGFPYHSTWARGHNREINEAMMAFSWTSFLVEHGTYAEWIDRGRPSPQHHVWAKYLQWVARKIDLELVLGKVRTIRQGWSVEVAGATTELEADGLMITGPGQSTKALAAHPRVLSIAEFWD-LAGKRKLP--ISSRAAVIGGGETAGSALDELVRHE----MLTISVISPMASYFENSLFSDPTKWNAL------SIQERRDVIRRTDRGVF---SVRVQESLLGDNRVHHLQGRVTRIVGQGDGVAVTLRNEMRADQVHNFDLVVDATGG----QPLWFLDL-FDSESADLLELAVGGPLTQQRIESSIGYDLAVTGLGAKLYLPNMAALAQGPGFPNLSCLGELSDRVLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D7E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50592 for 2057 contacts (-24.6/contact) +
2D Compatibility (PS) -29817 + (NN) -7609 + (LL) -4
1D Compatibility (HY) -6400 + (ID) 2650
Total energy: -97072.0 ( -47.19 by residue)
QMean score : 0.243
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