Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEYKDTLNLNETTFSMKGNLSVNEPKTYAKWQEQQAFKRMQNRKDNHGDFTLHDGPPYANGHLHLGHALNKILKDIVIKREYFKGKKIYYTPGWDCHGLPIEQQILEQLEKEKTSLEN--PTLFREKCRDHAKKFLEIQKNEFLQLGVLGDFEDPYKTMDFKFEASIYRALVGVAKKGLLKERHKPIYWSYACESALAEAEVEYKMKKSPSIFVAFDLKKEGLEKLKVKKASLVIWTTTPWTLYANVAIALKKDAVYALTQKGYLVAKALHEKLAALGVVDNAITHEFNSNDLEYLVATNPLNQRDSLVVLGDHVSLEDGTGAVHTAPGHGEEDYYLGLKYHLEVLMSVDEKGCYDEGIIHNQLLDKSYLGEHIFKAQKRIIEQLGDSLLLEREIEHSY--PHCWRTHKPVIYRATTQWFILMDEPFIQNDGSQKTLREVALDAIE--KVEFVPSSGKNRLKTMIENRPDWCLSRQRKWGVPLAFFIDKRTNKPCFESEVLEHVANLFEEKGCDVWWEYNIKDLLPPSYQDNAKHYEKVMHILDVWFDSGSTFKAVL---EDYHGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCVLNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVAFNDYQ-NDLRVSQTFFIQTEQHYKKFRNTLKFLLANFSDMDLKNLERPHDFSPLDHFILEALETISAGVNSAFEEHDLVKGLNILMAFVTNELSGIYLDACKDSLYCDSKNNEKRQAIQMVLLAVASQLCYFLAPILTHTIEEVLEHSQVLRAF----LQAKDVFDLKGISVLEKL--HLKEFKKPENFEAVLALRSAFNEELDRLKKEGVVKNSLECAIEVKEK------ALCENLVEELLMVSFVGVAKEKLSETPAFTLFKAPFYKCPRCWRFKSELENTPCKRCEEVLKER------------------ |
| 1GAX Chain:A ((1-862)) | -MDLPKAYDPKSV-----------EPKWAEKWAKNPFVA---NPKSGKPPFVIFMPPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGKTRHDLGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEVETEPTPGKLYTLRYEVEGGG---------FIEIATVRPETVFADQAIAVHPE--------------------------DERYRHLLGKR------ARIPLTEVWIPILADPAVEKDFGTGALKVTPAHDPLDYEIGERHGLKPVSVIN-----LEGRMEGERVPEALRGLDRFEARRKAVELFREAGHLVKEEDYTIALATCSRCGTPIEYAIFPQWWL-----------RMRPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVKDWNISRQLWWGHQIPAWYCEDCQAVNVPRPERYLEDP-------------------TSCEACGSPRLKRDEDVFDTWFSSALWPLSTLGWPEETEDLKAFYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDLRWLEMARNFANKLYNAARFVLLSREGFQ----AKEDTPTLADRFMRSRLSRGVEEITALYEALDLAQAAREVYELVWSEFCDWYLEAAKPALK---AGNAHTLRTLEEVLAVLLKLLHPMMPFLTSELYQALTGKEELALEAWPEPGGRDEEAERAFEALKQAVTAVRALKAEAGLPPAQEVRVYLEGETAPVEENLEVFRFLSRADLLPERPAKALVKAMPRVTARMPLEGLLDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREALSQIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GAX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253286 for 6855 contacts (-36.9/contact) +
2D Compatibility (PS) -87319 + (NN) -30250 + (LL) 8032
1D Compatibility (HY) -18800 + (ID) 9100
Total energy: -390723.0 ( -57.00 by residue)
QMean score : 0.364
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