Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDPYTYHLYYGD--------EIGSPGTALTFFEVPNMAKNHPSRNAISGLSLRVP--SDEALHYWDKRLDEHRIFHSKPIDQFGRKIIRLKDTDGLPVNLISDETSTQVTEVTPWEDSLVPAEYAIRGLGPVRFSVF-----KKEKTDRLLTKILGFERIGAYEDDDK---------LVTVFKTGN----VGLGGEVHVESRPDLEQGNLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDRFY-------------------FHSLYFRESNGILIELAT----DEPGFQTDFTKEHGTYVDLPPHLEERREDILAHLKPLDTDK |
| 1T47 Chain:A ((16-377)) | DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGD--GVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYGGAGVQHIALNTG---DIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTKPVQDRPTVFFEIIERHGSMGFGKGNFKALFEAIEREQEK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -75432 for 2389 contacts (-31.6/contact) +
2D Compatibility (PS) -33005 + (NN) -7931 + (LL) -36
1D Compatibility (HY) -4000 + (ID) 2250
Total energy: -122654.0 ( -51.34 by residue)
QMean score : 0.254
|
|
|