Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGDAIYIKAPSGEDILIDAGNKGKGKTVVNYLKKLKVKDIEIMIASHSDADNIGGLPEVMNNIKVK--------NLYAPKSTNTTAAYKNFVNTAKKK---KLTIKTAKAGVKLPVKG-------VNAQFVGPVKTYGKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAENDMIKAKKTLR-ADVLKVSTQGSKAATSKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK |
| 1WW1 Chain:A ((1-280)) | -----------------MNIIGFSK-----------------ALFSTWIYYSPERILFDAGEGVSTTL------GSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNRAVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKSEVSFGYHIFEVRRKFVTEEYHKKVLTISGDSLALDPEEIRGTELLIHECTFLDARDNHAAIDEVMESVKAAGVKKVILY-------HISTRYIRQLKSVIKKYREEMPDVEILYMDPRKVFEM-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13979 for 1877 contacts (7.4/contact) +
2D Compatibility (PS) -25102 + (NN) -8178 + (LL) 3652
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -27849.0 ( -14.84 by residue)
QMean score : 0.287
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