Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------MKVQRIQAIE----NLIHEKGSISLDDLCEQFNVSKNTVRRDIAKLLQKNTIQKVYGGVVSVYNNPEEIRP--FENRDTENHLEKQLIGKAAADFIEENDL----------------------------IFIDSGTTTSCLA-AALPTDKEITIITNSLDV--------INFASEMDNVKLIVIGSTFKPSTKSFVGVENWGFFEKYNITKAFMAATALSTAHGVM--------NSDILEYEIKRHMMEKAT--AKFLLVDHTKVDKSALLTYGELAEFDWLV-----TSKDIAGGCLGYCEDVGV--LVRLV----------------
4QVG Chain:A ((4-344))ELSALVPVLFGHAAFQQLNAGCQLGLFELLHERGPLSAEEVADALRLPRRSADILLLGTTALGLSTVTDGGYRNGAPIGAAFRDGLWPVLRDIVQYQDKIAYQPAADYVESLRTGQNAGIRHFPGTTRDLYSRLAAVPGLEELFYRGMHAWSQLSNPVLLAQPDFTRVHRVLDVGGGDAVNAVALARAHPSLRVTVLDR-PGALEVARKTIAEAGLEERVRTHAADIFTDSYPAGHDCVLFAHQLVIWSPEQNLTLLRKAYDAVEPGGRVLVFNAFTDDDRTGPLYAALDNVYFTTLPFRHSTIHRWADCESWLREAGFTDVGRTAPPGWTPHGVVSGSRPR


General information:
TITO was launched using:
RESULT:

Template: 4QVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45008 for 1722 contacts (-26.1/contact) +
2D Compatibility (PS) -26387 + (NN) 1535 + (LL) 52
1D Compatibility (HY) -4800 + (ID) 1800
Total energy: -76408.0 ( -44.37 by residue)
QMean score : 0.219

(partial model without unconserved sides chains):
PDB file : Tito_4QVG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QVG-query.scw
PDB file : Tito_Scwrl_4QVG.pdb: