Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------MKVQRIQAIE----NLIHEKGSISLDDLCEQFNVSKNTVRRDIAKLLQKNTIQKVYGGVVSVYNNPEEIRP--FENRDTENHLEKQLIGKAAADFIEENDL----------------------------IFIDSGTTTSCLA-AALPTDKEITIITNSLDV--------INFASEMDNVKLIVIGSTFKPSTKSFVGVENWGFFEKYNITKAFMAATALSTAHGVM--------NSDILEYEIKRHMMEKAT--AKFLLVDHTKVDKSALLTYGELAEFDWLV-----TSKDIAGGCLGYCEDVGV--LVRLV---------------- |
4QVG Chain:A ((4-344)) | ELSALVPVLFGHAAFQQLNAGCQLGLFELLHERGPLSAEEVADALRLPRRSADILLLGTTALGLSTVTDGGYRNGAPIGAAFRDGLWPVLRDIVQYQDKIAYQPAADYVESLRTGQNAGIRHFPGTTRDLYSRLAAVPGLEELFYRGMHAWSQLSNPVLLAQPDFTRVHRVLDVGGGDAVNAVALARAHPSLRVTVLDR-PGALEVARKTIAEAGLEERVRTHAADIFTDSYPAGHDCVLFAHQLVIWSPEQNLTLLRKAYDAVEPGGRVLVFNAFTDDDRTGPLYAALDNVYFTTLPFRHSTIHRWADCESWLREAGFTDVGRTAPPGWTPHGVVSGSRPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45008 for 1722 contacts (-26.1/contact) +
2D Compatibility (PS) -26387 + (NN) 1535 + (LL) 52
1D Compatibility (HY) -4800 + (ID) 1800
Total energy: -76408.0 ( -44.37 by residue)
QMean score : 0.219
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