Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGLLDFLVNIASTPAILVALIAIIGLVLQKKGVPDIVKGGIKTFVGFLVVSGGAGIVQNSLNPFGKMFEHAFHLVGVVPNNEAIVAVALTKYGSATALIMLAGMIFNILIARFTKFKYIFLTGHHTLYMACMIAVIFAVAGFTSFSLILFGGLALGIIMSVSPAFVQKYMIQL-----TGNDKVALGHFGSLG--YWLSGFIGGIVGDKSKSTEDIKFPKSLSFLRDSTVSITISMAIIYLIVAVFAGEAYIAKEISNG----------VNGLVYA-LQLAGQFAAGVFVILAGVRLILGEIVPAFKGISEKLVPNSKPALDCPIVYPYAPNAVLIGFISSFVGGLVSMIVMIVTGTTVILPGVVPHFFCGATAG-------VIGNASGGVRGATIGAFVQGILISFLPIFLMPVLGGL-----GFKGSTFSDADF-GL--TGIILGALNHVGGAIAIVIGIVVILIGLFGI-------SFVGKSTHKEG----------------- |
| 4OV8 Chain:A ((6-472)) | -DTLNDVIQDPTRRNKLINDNNLLKGIIMGRDGPVPSSRELIV-----------------RPDTLRAIINNRATIETTTMEAEFTETLMESNYNSASVKVSAPCITANSEYSESSSFKNT--ETEKSMYTSSRYLFPQGRIDFTTPDS--------GDVIKLSPQFTSGVQAALAKATGTEKREALQNLFQEYGCVFRTKVHIGGVLS--AHTMETFSRSENETEVKQD-VKAGLEGAVKGWGGGATAGHGNTQGTITTSQNRKLNVKYIVNGGDYTKIQNTEEWVASTNQSEHWRVIEVTEVTAVADLLPQPIRGQVKDLLK-PLLGKWVD--------VEKVPGLESLPVSVYRPKGAIPAG---WFWLGDTADASKALLVKPTLPARSGRNPALTSLHQGSGMTEQPFVDLPQYQYLSTYFGSFAHDTPPGSTLRGLRPDHVLPGRYEMHGDTISTAVYVTRPVDVPFPEDEAFDLKSLVRVKLPGSGNPPKPRSALKKSMVLFD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -339326 for 2961 contacts (-114.6/contact) +
2D Compatibility (PS) -42830 + (NN) 1127 + (LL) 3252
1D Compatibility (HY) 4400 + (ID) 3500
Total energy: -376877.0 ( -127.28 by residue)
QMean score : 0.062
|
|
|