Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------M-TKDLLLELGLEEL-PAYVVTPSEKQLGQK-MV-KFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQ-TDLTEDFKGPSKKIALDAEGNFSKAAQG-FV-RGKGLSVDDIEFREVKGEEYVYVTKHETGKS-AIDVLASVTEVLTE-LTFPVNMHW--ANNSFEYIRPVHTLV-VLLDDQALELDFLDIHSG-RISRGHRFLGSDTE--ILSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKENISVEIDEDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGK-----LLPNFISVRNGNAEHIENVIKGNEKVLVA-RLEDGEFFWQEDQKLNIADLVEKLKQVTFH-EKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDLLTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHY----MPTSADGE-LPETRVGAILALADKFDTLLSFFSV-GLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDYANQKEVMAFISARIEKMIGSKVPKDI--REAVLE-SDTYIVSLILEASQ--------ALVQKSKDAQYKVSIESLSRA-FN-LAE-KV-THSVSVDYSLFENNQEKALYQAILSLELTEDMHDNLDKLFALSPIINDFF-DNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFNLLNTK |
| 4U3E Chain:A ((12-670)) | SGLVGSHMKVQYSFEREFEELMS-----DLLSKYGYEMFQMDGLGDQLDVVKFTEDFVRRGIIESTIDANANVRVTNISTYFIEISKPHTYLYS--LYRIWQKMKEMFGKGVADEFVE-AQING--AVYLHDRHHAALMPYCFAYTLKPIVEKGLPFIKTIKSEPAKHLSTFIQHVIQFVMFASNQSSGAVGLPDFFVWMW-----YFVKKDLKEGIIPRDKLDWYIEQHFQILTYSLNQP-----IRTTQSPYTNFTYLDRNYIKAIFEGERYP-------DGSLITDHVEDII-ALQKHYWEWVSRERERQMFTFPVLTASLLYKDGKFLDEDSARFINKI---NMKWQDTNWYISDSI-----DAVASCEKLKGRMNSIGGSDLNIGSFKVITVNLPRIALESG----------------------GDREKYLQILRHRVQLIKKALAAVREIIKERISEGLLPLYENGLMLLNRQYGTIGVTG-----VWESASIMGLTTEDIDGLKYTEEGEVFVDNVLDTI---REEAEKGYHEYGFTF-NIEQVPAEKAAVTLAQKDRFLFGEKQPFEIYSNQWVPLMANTDVLNRIRYSGKWDKKVSGGAILHINLGESFKTEEESFN--MVKMIADMGVMYFAFNTKISVCEDGH--AFYG---------------ERCPVCGKAKVDEYMRIVGYLVPVSAFNKERREIEYP------RRQFYDSLTIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 141663 for 4481 contacts (31.6/contact) +
2D Compatibility (PS) -55309 + (NN) 26416 + (LL) 7980
1D Compatibility (HY) 12400 + (ID) 1250
Total energy: 131900.0 ( 29.44 by residue)
QMean score : 0.026
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