Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCKYKAIIFDMDGVLFDTELFYYKRRERFLKQHGITIDH---LPMNFF---------IG-GNMKQVW----KSVLGDQYDTWDIDKLQQDYSRYKEDNPLPYKDLIFQDCKRVIEKLHHKGYLLGLASSSTRHDIMLALESFNLDTYFKVILSGEEFSESKPNPAIYNRAAELL-DIPKQQILIVEDSE-KGITAGIAAGIDVWAIEDK-YFGMNQSQANVLVSDLSQFFVKLDNY |
| 3ED5 Chain:A ((4-231)) | MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGYEADGALLEQKYRRFL-----EEGHQLIDGAFDLISNLQQ-QFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNIE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ED5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -112287 for 1593 contacts (-70.5/contact) +
2D Compatibility (PS) -22259 + (NN) -8901 + (LL) 48
1D Compatibility (HY) -9600 + (ID) 2000
Total energy: -154999.0 ( -97.30 by residue)
QMean score : 0.438
|
|
|