Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVSSSPNITFMLQYTEANPQYVDYTNREEAVKIDEELSLETNRQMIEGLTE--DELTRIQEAVPETQLNFREYIDYMNRSYATEEQSKELTAIFTQEADYLQKLRLIDLKNKLESAYQNGSLLWQGVISFDNAFLAEQGLYDVATGQVDQKAIKAVMRDMMPTL-IQKEGLSDSAFWWGNIHLNTDNIHIHFGLSEVESNREKIFYQPRG-RMEYKGNFSQKTINRFKSGVYHGLL-----KEETRSNLLRKEQILANLKADFITSIYQKDKITSSAEKN------FLEQAYNHLPLNKKWRYGSNARDFA-VSKFFLDRYLDSYLNNEGSAAYQEFLKETRDFLQTYEGVYSAEKNKIYEKLRKV-DGQTIRTLAESKGYD-----LEHHLARRVMDLRERLAN-NILRSFREAAPQIQDVQLEKNLESF-SVLNQKKILEQHPEASVVKSQKAWQKLGYFVKAGEQPLEIIRPVYKSYDK-HGKGIGRPEFVSDTVYDISQLTE-NI-QLKSLT-LK-DLSLFSSNELKELVDAAKLKTNPTERERRELGTYRYALKLSILESSQKELQVRQKLLEQV-QPL-ASDQ-PFLDF-KKQLIAQELQAIALQLTPNYKLSEDDKALKN-RL-KRQ-FE-DSVALPVSKATPGAIQLPIRQLWTELGLVHH---IQDENILTLLKGTSTTKQAYIEELQTHISIFQLKYQINNRNKQISQLSDEATIKEMRIANA-KGFSELKRLYDTLQ-PSDDGQNQISQAVSKQLQERKVIKKAQLQQTQR-SGKINTD------FMR-QLTASLNRSQQASKKALMERARSD----EREEQEERRQAQR- |
| 1D8C Chain:A ((3-722)) | -QTITQSRLRID-------ANFKRFVDEEVLPGTGL-----DAAAFWRNFDEIVHDLAPENRQLLAERDRIQAALDEWHRSNPGPVKDKAAYKSFLRELGYLVP---------------------------------QPERVTVETTGIDSEITSQAGPQLVVPAMNARYALNAANARWGSLYDALYG--------------SDIIPQEGAMVSGYDPQRGEQVIAWVRRFLDESLPLENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVGYRGDAAAPTCILLKNNGLHIELQIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVA----------------AVDAEDKILLYRNLLGLMQGTLQRKLNDDRHYTAADGSEISLHGRSLLFIRNVGHLMTIPVIWDSEGNEIP----EGILDGVMTGAIALYDLKVQ--------KNSRTGSVYIVKP----------------KMHG-----PQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRV--------------AFINTGFLDRTGDE-----------MHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGKGMWAMPDLMADMYSQKGDQLRAGANTAWVPSPTAATLHALHYHQTNVQSVQANIAQTEFNAEFEPLLDDLLTIPVAENANWSAQEIQQELDNNVQGILGYVVRWVEQGIGCSKVPDIHNVALMEDRATLRISSQHIANWLRHGILTKEQVQASLENMAKVVDQQNAGDPAYRPMAGNFANSCAFKAASDLIFLGVKQPNGYTEPLLHAWRLREKES |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1D8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 213744 for 5541 contacts (38.6/contact) +
2D Compatibility (PS) -67301 + (NN) 1993 + (LL) 10480
1D Compatibility (HY) -2000 + (ID) 4350
Total energy: 152566.0 ( 27.53 by residue)
QMean score : 0.055
|
|
|