Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDNSATTIPYPEVLRTYQEVASKIYGNPSSLHELGTTSSRILEASRKQIASLLELKANEIFFTSGGTEADNWVIKGLAFEKQHFGNH---IIVSDIEHPAIKESAKWLGEY-GFEIDYAPVDDKGFVDVEALVKLIKP--ETILISIMAINNEIGSIQPIKAISDLLSDKPTISFHIDAVQAIGKIPTKDYLTERVDFASFSSHKFHGVRGVGFLYIKEGKRISPLLTGGGQESDLRSTTENVAGIAATAKALRMVMDKEVVAIPKISKMKTIIHDELAKYEDITLFSGKEDFS--PNIITFGIKGVRGEVLVHAFEGHDIFISTTSACSSKAGKPAGTLIAMGISTKLAQTAVRISLDDDNDMGQVEQFLTIFKQVYEKTKKVRG- |
| 4ISY Chain:A ((12-398)) | SAYLDHAATTPMHPAAIEAMAAVQRTI-GNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEFG-VPMHSDAIQAVGQLPL-DFGASGLSAMSVAGHKFGGPPGVGALLLRRDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDANGIECST--------GSPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ISY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174939 for 3317 contacts (-52.7/contact) +
2D Compatibility (PS) -40345 + (NN) -22215 + (LL) 584
1D Compatibility (HY) -14800 + (ID) 5700
Total energy: -257415.0 ( -77.60 by residue)
QMean score : 0.513
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