Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQLNSSFMIGKVEIPHRTVLAPMAGITNSAFRTIAKEFGAGLVVMEMISEKGL--LYNN------------------------------EKTL-HMLH-I--DENEHPMSIQLFGG-DAEGLKRAADFIQSNTKADIVDINMGCPVNKVVKNEAGAKWLRDPEKIYHIVKEVTSVLDIPLTVKMRTGWSDSSNAIENALAAESAGVSALAMHGRTR----------------------EQMYTGTCD----HETLGKVAKAVTSIPFIANGDIRTVHDAKFMIEEIGADAIMVGRGARS-NPYIFTQINHFFETGEILPDLPFEKMLDVAEDHLTRLVNLKGETIAVREFRGLAPHYLRGKSGAAKIRGAVSRAETLAEVQELFAGLR |
| 1GTE Chain:A ((532-835)) | ----DISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEA-SGADALELNLSCPHGMG------LACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTD---IVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLH-SGASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHQKGKPVPRIAELMGKKLPNFGPYLEQRKKIIAEEKMRLKEQNERKPFIPKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179349 for 2082 contacts (-86.1/contact) +
2D Compatibility (PS) -25170 + (NN) -7295 + (LL) 696
1D Compatibility (HY) -5600 + (ID) 2050
Total energy: -218768.0 ( -105.08 by residue)
QMean score : 0.476
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