Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVATLIIIRGNSASGKSKIAKQLQAELGENTLLLSQDYLRREMLGTKDG-----------ENT-TTI----PLLINLLNYG---YHNCSYIILEGILRSDWYTPVWKHILKHNPNNTYAYYYDLSFQETVKRHSTRLKSLEFG---EDSL----ARWWLEKD----FLK-EIPEKILTKAMSLEDVKKLIMTDVLP
1TEV Chain:A ((3-193))
--PLVVFVLGGPGAGKGTQCARIVEKY--GYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDK
General information:
TITO was launched using:
RESULT:
Template:
1TEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59976 for 1059 contacts (-56.6/contact) +
2D Compatibility (PS) -17340 + (NN) -10941 + (LL) 332
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -92325.0 ( -87.18 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_1TEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TEV-query.scw
PDB file :
Tito_Scwrl_1TEV.pdb
: