Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLDDDYH-FSAVAITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLLLQ--VPTERGHLPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
1O3T Chain:A ((2-200))
---------------------PTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYG---------
General information:
TITO was launched using:
RESULT:
Template:
1O3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99864 for 1395 contacts (-71.6/contact) +
2D Compatibility (PS) -20839 + (NN) -2973 + (LL) 2848
1D Compatibility (HY) -10000 + (ID) 2300
Total energy: -133128.0 ( -95.43 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_1O3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O3T-query.scw
PDB file :
Tito_Scwrl_1O3T.pdb
: