Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------MAELENRKQFAQM-----LAPGVKTLKLHPDYKVRRK--KNEKTGQSYIDKIALQLGVS-PNTIKSWIGQMGANYIPGRIDDGKLFGMIWII----------------------LEKTDLDIEWLTDLLEATTIPVIKPA----------LPV-------------WAA-----SCLKKAKILRKDGLFGAPSEGEIENVVKRLFHDRPGQETNALTEQPITHNLPSRWSGRFIGRSFDMEAIRQWMLSPSPVCLITGWAGMGKTTIALE---AAYSCVDDTS------VWPAFNSIIWVSADWKGLSFSDFLNTIAYQLGRKEQIDKSINVKRFVVRNALANYTREKPI---LLIVDSIDTAERDIHEFITSLPQGVK------VLLTARENVKQTYRESFGEMTAIQLSGLDQTDAHEFFQQEVHHCLQTCNLP------RKREKLEQLLHLSSDLKNEF-ISATAGN----PKAMALSIAYMSDDDIPAQ---QLIHELGKAGYS------------LLELFEFL-----FGRT----WDRCN-----EDTRKLWQ------TLCFFSKPPDEKSL--------------------------------AAAAGLDARR---------FHYAMEQMRSYALIQPERSQGRTQYLAHQTVVAYGEQHLSEQHEYEKEARNRWAHYYIDYAETHLKR----EQPNSIYWSYLLGRNLDQMKQEWPNILKVIQWASETEQKEILIELITRISHFLSRINLPL---RIEYGRKAAD-------------AAHHLGQHTREAYFRIDTSGWALMEVNDLDGALQQIEAGLKILEQSDAHDAY------DLKVWGHALKARLFLKDGQQEKAETILNEIENQPISPTIQHRVLLVRGDLSFARGYHVEAIQLYEAANEISSTYGGEKTIEAYFNLGVAYVKCDQFEKAEEAFEQ----MLYDKHNANQVELIYYHYGMAQLLYRKGEKTKAVESNQKAIRLIDSWEPAIGIRGEVERLARATKENE----
5AOR Chain:A ((119-1158))LGEAYRPLEQRDMNEAEAFDVNAAIHGNWTIENAKERLNIYKQTNNIRDDYKYTPVGPEHARSFLAELSIYVPALNRTVTARESGSNKKSASKSCALSLVRQLFHLNVIEPFSGTLKKDEQLKPYPVKLSPNLINKIDEVIKGLDLPVVNPRNIKIELDGPPIPLIVNLSRIESSVIPWAPPQANWNTWHACNI--DEGELATTSIDDLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDN----------PVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKLEAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPG----RAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELT---PLGRLLARLPIE-PRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNICVHKEKRKVLTTESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSMVSPLQVILFGSRKIDLAANNIVRVDNWLNFDIEPELAAKIGALKPALEDLITVACDNPSDILRLE---------EPYAQLVKVVKDLCVKSAGDFGLQR


General information:
TITO was launched using:
RESULT:

Template: 5AOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3789 -259526 -68.49 -324.41
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -68.49
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.165

(partial model without unconserved sides chains):
PDB file : Tito_5AOR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AOR-query.scw
PDB file : Tito_Scwrl_5AOR.pdb: