Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNEQETIQEKAILVGCQLPHITDEHFENSMEELASLTKTADGKVLTSVTQKRNRADAATYIGKGKVEELKALVEELEADLLIFNDELSPSQLKSLATAIEVKMIDRTQLILDIFAKRARTREGKLQIELAQLQYALPRLTGQGINLSRQGGGIGARGPGETKLETDRRHIRNRIHEINTQLSTVIRHRSRYRERRKKNGVLQIALVGYTNAGKSTWFNRLTSA-DSYEEDLLFATLDPMTRKMVLPSGYSVLLSDTVGFIQDLPTTLIAA--FRSTLEEVKEADLILHLIDSSNEDYAGHEKTVLRLLEELEADDIPMLTAYNKRDQKLPDFIP-----------TAGR-DHIMVSAKFEDDAAAFKEAIQRYLRQELLTSFEAHVPASEGKLLSRIKSETMVDRFYFNEENEQYDISGYVQEEQSIIGELKKYM
5DN8 Chain:A ((177-348))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VGIKIAMIGRPNVGKSTLINRLLGEERVIVYD-------SIYIPFARN-DENYTLIDTAGIRRRAKIQ---KFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIV-E---AGVSLIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESY-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5DN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 700 -89697 -128.14 -614.36
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -128.14
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_5DN8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DN8-query.scw
PDB file : Tito_Scwrl_5DN8.pdb: