Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVNEKRLLEEFLELVQIDSETKHEAEICKVLKRKFSDLGVDVKEDDTMDITGHGAGNLICTLKGTKQTDTIYFTSHMDTVVPGNGVKPVVENGYVKTDGTTILGADDKAGLAAMFEAIKVLKEENIEHGTIEFIITVGEESGL-IGAKALDRSMITASYGYALDSDGKVGNIIVAAPTQAKVRAAIFGKTAHAGVEPEKGISAITIASKAISKMPLGRID--E---------ETTANIGRFEGGTQTNIVCDEVHILAEARSLVPEKMEAQVQKMKAAFEEAAADMGGRAEVEIEVMYPGFKYQDGDQVVEIAKKAAAKIGRPSELQTSGGGSDANVIA-GHGIPTVNLAVGY-EQIHTKNEKMPIEELVKTAEMVVAIIEEAAK
4Q7A Chain:A ((11-359))--MSMTTADLLRGLVSIPSPSGAEAPAVEWLCQQMAALGYQAEPDG--------AGNAVGTRGE--GPREIMLLGHIDTVPGEVPV--QVVDGVLYGRGA----VDAKGPLATFVVAGARAKL--PPGVRLTVVGAVEEEVMSSRGARHLIATREAPDAVVIGEPSG-WDGVVLGYRGSVALEYRVTVPMSHSA-GPEA--TAAELAADFWYRLRTWCAEWSVGIDHAFHRVEPKLNA----LNSSSDGLYGEAVARIGLRLPPALSPEEAIAVATSLASEG------EVTAT--VNAPAFQTDKRQPIVAAFLAAVRAHGGTPRLKLKTGTSDMNLVGPAWGCPIVAYGPGDSRLDHTPEEHVPLADLERATAILTTAIERVAA


General information:
TITO was launched using:
RESULT:

Template: 4Q7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1936 -17588 -9.08 -52.50
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -9.08
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_4Q7A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q7A-query.scw
PDB file : Tito_Scwrl_4Q7A.pdb: