Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTTTRTERNFAGIGDVRIVYDVWTPDTAPQAVVVLAHGLG--EHARRYDHVAQRLGAAGLVTYALDHRGHGRSGGKRVLVRDISEYTADFDTLVGIATREYPGCKRIVLGHSMGGGIVFAYGVERPDNYDLMVLSAPAVAAQDLVSPVVAVAAKLLGVVVPGLPVQELDFTAISRDPEVVQAYNTDPLVHHGRVPAGIGRALLQV--GETMPRRAPALTAPLLVLHGTDDRLIPIEGSRRLVECVGSADVQLKEYPGLYHEVFNEPERNQVLDDVVAWLTERL |
| 3PF8 Chain:A ((16-266)) | NLYFQGMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGK-FENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHSQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALE--------------------------GNTQGVTYNPDHIPDRLPFK-DLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQN--STLHLIEGADHC-FSDSYQKNAVNLTTDFLQN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150507 for 2129 contacts (-70.7/contact) +
2D Compatibility (PS) -26734 + (NN) -11707 + (LL) 3428
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -194470.0 ( -91.34 by residue)
QMean score : 0.400
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