Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQAFTVVIPARYASTRLPGKPLQDIAGQPMIQRVWNQARKS-AASRVVVATDDERILAACQGFGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAIATLA-EPIHEVSALFNPNVVKVATDIDGLALTFSRAPLPWARDAFARDRDSLPEGVPYRRHIGIYAYRVGFLADFVAWGPCWL--E-NAESLEQLRALWHGVRIHVADARENMLPGVDTPEDLERVRRVLGG
1H7E Chain:A ((1-239))
--SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQAFGGKAIMTRNDHESGTDRLVEVMHKVE---ADIYINLQGDEPMIRPRDVETLLQGMRDD-PALPVATLCHAISA-AEAAEPSTVKVVVNTRQDALYFSRSPIPYPRN---------AEKARYLKHVGIYAYRRDVLQNYSQLPESMPEQAESLEQLRLM---NAGINIRTFEVA-ATGPGVDTPACLEKVRALMAQ
General information:
TITO was launched using:
RESULT:
Template:
1H7E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136176 for 1823 contacts (-74.7/contact) +
2D Compatibility (PS) -26200 + (NN) -17093 + (LL) 1744
1D Compatibility (HY) -15200 + (ID) 4650
Total energy: -197575.0 ( -108.38 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_1H7E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H7E-query.scw
PDB file :
Tito_Scwrl_1H7E.pdb
: