Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGELANYKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDDNIVRLYDIVHS-----DAHKLYLVFEFLDLDLKRYMEGIP-KDQPLGADIVKKFMMQLCKGIAYCHSHRILHRDLKPQNLLINKDG-NLKLGDFGLARAFG--VPLRAYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIFAEMCNRKPIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYLPDFKP-SFPQWRRKDLSQVV-PSLDPRGIDLLDKLLAYDPINRISARRAAIHPYFQES |
1J1B Chain:A ((55-342)) | ------SYTDTKVIGNGSFGVVYQAKLCDSG---ELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187822 for 2171 contacts (-86.5/contact) +
2D Compatibility (PS) -29123 + (NN) -8904 + (LL) 908
1D Compatibility (HY) -29200 + (ID) 5200
Total energy: -259341.0 ( -119.46 by residue)
QMean score : 0.489
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