Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVWLASLFLCALVVKNSEGGSVLGAPDESNCGCQNGGVCVSYKYFSRIRRCSCPRKFQGEHCEIDASKTCYHGNGDSYRGKANTDTKGRPCLAWNAPAVLQKPYNAHRPDAISLGLGKHNYCRNPDNQKRPWCYVQIGLRQFVQECMVHDCSLSKKPSSSVDQQGFQCGQKALRPRFKIVGGEFTEVENQPWFAAIYQKNKGGSPPSFKCGGSLISPCWVASAAHCFIQLPKKE-------NYVVYLGQSKESSYNPG-EMKFEVEQLILHEYYREDSLA---YHNDIALLKIRTSTGQCAQPSRSIQTICLPPRFTDAPF---GSDCEITGFGKESESD--YLYPKNLKMSVVKLVSHEQCMQPHY-YGSEINYKMLCAADPEWKT----DSCKGDSGGPLICNI-EGRPTLSGIVSWG-RGCAEKNKPGVYTRVSHFLDWIQSHIGEEKGLAF |
| 1LMW Chain:B ((1-248)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IIGGEFTTIENQPWFAAIYRRHRGGS-VTYVCGGSLMSPCWVISATHCFI------DYPKKED-YIVYLGRSRLNSNT-QGEMKFEVENLILHKDYSAD---TLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMY---NDPQFGTSCEITGFGKENSTDYLYP--EQLKMTVVKLISHRECQQPHYY-GSEVTTKMLCAADP----QWKTDSCQGDSGGPLVCSLQ-GRMTLTGIVSWGR-GCALKDKPGVYTRVSHFLPWIRSHTKEE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133809 for 1822 contacts (-73.4/contact) +
2D Compatibility (PS) -24290 + (NN) -10378 + (LL) 9468
1D Compatibility (HY) -26000 + (ID) 7950
Total energy: -192959.0 ( -105.91 by residue)
QMean score : 0.243
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