Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD
1A78 Chain:A ((2-134))
-SAGVAVTNLNLKPGHCVEIKGSIPPDCKGFAVNLGEDASNFLLHFNARFDLHGDVNKIVCNSKEADAWGSEQREEVFPFQQGAEVMVCFEYQTQKIIIKFSSGDQFSFPVRKVLPSIPFLSLEG-LAFKSITTE
General information:
TITO was launched using:
RESULT:
Template:
1A78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66170 for 973 contacts (-68.0/contact) +
2D Compatibility (PS) -14193 + (NN) -3478 + (LL) 132
1D Compatibility (HY) -12000 + (ID) 3000
Total energy: -98709.0 ( -101.45 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_1A78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A78-query.scw
PDB file :
Tito_Scwrl_1A78.pdb
: