Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAW-----------DPATNDA---KARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPAARTKFAQSCVRIMKDYGFDGVDIDWEYPQ-AAEVDGFIAALQEIRTLLNQQTIA--DGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKITNHQAALFGDAAGPTFYNALREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPNADYWLVGCDECVRDKDPRIASYRQLEQMLQGNYGYQRLWNDKTKTPYLYHAQNGLFVTYDDAESFKYKAKYIKQQQLGGVMFWHLGQDNR-NGDLLAAL-------DRYFNAADYDDSQLDMGTGLRYTGVGPGNLPIMTAPAYVPGTTYAQGALVSYQGYVWQTKWGYITSAPGSDSAWLKVGRLA |
| 3G6M Chain:A ((19-403)) | --TGSINAVYFTNWGIYGRNFQP-------------ADLQASKILHVLYSFMNLRVDGTVYSGDTYADLEKHYSDDSWNDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTWST-------NFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDWEYPASETDANNMVLLLQRVRQELDSYSATYANGY---HFQLSIAAPAGPSHYNVL--KLAQLGSVLDNINLMAYDYAGSWDSVSGHQTNLYPSTSNPS-----------------------STPFSTKAAVDA-YIAAGVPASKIILGMPIYGRAFVGTD----GPGKPYSTIGEGSW-----------------ESGIWDYKVLPK-----AGATVITDSAAGATYSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASADKTGSDSLIGTALSSMGSHDSTQNCLSYPNSKFDNIKN-------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -169076 for 3183 contacts (-53.1/contact) +
2D Compatibility (PS) -39764 + (NN) -30123 + (LL) 6532
1D Compatibility (HY) -20000 + (ID) 5900
Total energy: -258331.0 ( -81.16 by residue)
QMean score : 0.452
|
|
|