Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGENV-TKVSTFILVGL-----PT---APGLQYL----------LFLLFLLTYLF-VLVENLAIILIVWSSTSLH-RPMYYFLSSMS-----FLEIWYVSDITPKMLEGFLLQQKRISFVGCMTQLYFF-SSLVCTECVL-----LASMAYDRYVAICHPLRYHVLVTPGLCLQLVGFSF---------VSGFTIS-M-IKVCFISSVTFCGSNVLNHFFCD----ISPI------LKLACTDFSTAELVDFILAFIILVFPLLAT--ILSYWH----ITLAVLRIPSAT---------GCW---RAFST--CASH--------------LTVVTVFYTALLFMYV-R------PQAI------------DSQSSNKLISAVYTVVTP-IINPLIYCLRNKE-FKDALKKALG-LGQTSH |
4QT9 Chain:A ((19-432)) | LSDDALMDTVQRRTFLYFWEGAEPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYVTREEGLARMERIVSFLEKADRFHGAYPHWWYGDT-------GKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHWSPTYGWEMDFPIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQNGAIVSPHKVEGIELHLRYQGTEAGPLFWAQYSFLGLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIRNPKHYKGFGPDCWGLTASYSVDGYAAHSPNEQDDKGVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYPQRYLAIDQGPIAVMIENYRTGLLWKLFMSHPDVQAGLTKLGFNTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -392976 for 2384 contacts (-164.8/contact) +
2D Compatibility (PS) -29949 + (NN) 7112 + (LL) 668
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -425545.0 ( -178.50 by residue)
QMean score : 0.155
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