Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQYSVGNQHSNYRSLLFPFLCSQMTQLTASGNQTMVTEFLFSMFPHAHRGGLLFFIPLLLIYGFILTGNLIMFIVIQVGMALHTPLYFFISVLSFLEICYTTTTIPKMLSCLISEQKSISVAGCLLQMYFFHSLGITESCVLTAMAIDRYIAICNPLRYPTIMIPKLCIQLTVGSCFCGFLLVLPEIAWISTLPFCGSNQIHQIFCDFTPVLSLACTDTFLVVIVDAIHAAEIVASFLVIALSYIRIIIVILGMHSAEGHHKAFSTCAAHLAV----FLLFFGSVAVMYLRFSATYSVFWDTAIAVTFVILAPFFNPIIYSLKNKDMKEAIGRLFHYQKRAGWAGK- |
1LLQ Chain:A ((2-295)) | ----SVAHHEDVYSHNLPPMDEKEMALYKLYRPERV---------TPKKRSAELLKEPRL-----------------NKGMGFSLYERQYLGLHGLLP--PAFMTQEQQAYRVITKLREQP--NDLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYTP--TVGLACQNF-------GYIYRKPKGLYITINDN-SVSKIYQILSNWHE------EDVRAIVVTDG----ERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LLQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289469 for 2173 contacts (-133.2/contact) +
2D Compatibility (PS) -29850 + (NN) 3044 + (LL) 5964
1D Compatibility (HY) -4800 + (ID) 2100
Total energy: -317211.0 ( -145.98 by residue)
QMean score : 0.172
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