Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAASSLEQKLSRLEAKLKQENREARRRIDLNLDISPQRPRPTLQLPLANDGGSRSPSSESSPQHPTPPARPRHMLGLPSTLFTPRSMESIEIDQKLQEIMKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPRTSGVLSQPHLPFFR |
| 4NZW Chain:B ((25-275)) | --------------------------------------------------------------------------------------------------------------------------LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSPYITRYFGSYLKSTKLWIIMEYLG-GGSALDLLKPGPLEETYIATILREILKGLDYLHSERK-IHRDIKAANVLLSEQGDVKLAAFGVAG-------------TPFWMAPEVIK-----Q--YDFKADIWSLGITAIELAKGEPPNSDLHP-MRVLFLIPKNSPPTLEGQH--SKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRYKRWKS----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140264 for 1849 contacts (-75.9/contact) +
2D Compatibility (PS) -25147 + (NN) -13772 + (LL) 8396
1D Compatibility (HY) -20400 + (ID) 4600
Total energy: -195787.0 ( -105.89 by residue)
QMean score : 0.438
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