Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAPGPAQAAAAESNSREVTEDAADWAPALCPSPEARSPEAPAYRLQDCDALVTMGTGTFGRVHLVKEKTAKHFFALKVMSIPDVIRRKQEQHVHNEKSVLKEVSHPFLIRLFWTWHEERFLYMLMEYVPGGELFSYLRNRGHFSSTTGLFYSAEIICAIEYLHSKEIVYRDLKPENILLDRDGHIKLTDFGFAKKLVDRTWTLCGTPEYLAPEVIQSKGHGRAVDWWALGILIFEMLSGFPPFFDDNPFGIYQKILAGKLYFPRHLDFHVKTGRMM
3O7L Chain:B ((17-266))
--------------------EFLAKAKEDFLKKWE--TPSQNTAQLDQFDRIKTLGTG---RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN
General information:
TITO was launched using:
RESULT:
Template:
3O7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142526 for 1885 contacts (-75.6/contact) +
2D Compatibility (PS) -25615 + (NN) -3383 + (LL) 1516
1D Compatibility (HY) -27600 + (ID) 6150
Total energy: -203758.0 ( -108.09 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_3O7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O7L-query.scw
PDB file :
Tito_Scwrl_3O7L.pdb
: