Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGEKKLKAAVVLSGCGHLDGAEVREVVLSLLVLDQQEVEVKCFAPDI-NITQVVNHKTTEAVKEKRNVLVEAARVARSEICDLKEA--KAEDFDMLVVPGGYGVAKNLSDLAEDKEVVTVIPEFERLVSEFFATKKPIGAICISPAIIVS--ILSSKTSKGESKIKVTIGDDREKLIEKLGGEHIKCDTGLSIEDEEHNVFSCSAYMR---RDESTYSVYQGIKHMIDSMVKKTNKRI |
3CNE Chain:A ((2-174)) | ----AKKVAVLA-----VNPVNGCGLFQYLEAFFENGISYKVFAVSDTKEIKT-----------NSGMVL-------IVDDVIANLKGHEDEFDALVFSCGDAVPVFQQ-YA----NQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFTGITKG--------KKVAVHPLAKPAIQNGIAT------DEKSE-IDGNFFTAQDENTIWTMLPKVIEALK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116172 for 1454 contacts (-79.9/contact) +
2D Compatibility (PS) -17488 + (NN) -651 + (LL) 3532
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -134779.0 ( -92.70 by residue)
QMean score : 0.355
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