Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFIDEVKLYLKAGDGGDGCVSFRREKFVEFGGPNGGNGGKGGNIVFVSDANLNTLLNFRYRRHVKAGSGKSGASRDRSGTAGKNIVLKVPVGTQIIDEESEKIILDFNKPDMEFLIAQGGKGGLGNTNFKSSINRAPRHFTCGQFGEEKYVVLKLKVLSDVGIIGMPNAGKSKFLTRCSNADTKVGDYPFTTIKPHLGVAKVDNS--EVVIVDIPGIITDAHLGIGLGHKFLKHVERCKILLHLIDVTHDNVVSAYNCMRNELELYNSDLVKKEEIIVLNKCDLLRKVE-IFEKKNHLANYLNKEVLCLSI--GEDLQPILRLLNEKLKKGSSKKVDVYDPFKR |
| 1U8Z Chain:A ((4-167)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAG---YAA----IRD---NYFRSGEGFLCVFSITEMESFAATADFREQILRVKE-DENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIRAR------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70834 for 1218 contacts (-58.2/contact) +
2D Compatibility (PS) -16622 + (NN) -4820 + (LL) 7304
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: -90072.0 ( -73.95 by residue)
QMean score : 0.490
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