Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVMNTYAKSGVDLKLYNKLMKEVKLVVDENKREEVISEVGSFSALFDFAALSKKYDHPV------LVSSTDGVGTKLLIAQEVDKHDTIGIDLVAMCVNDLLAQGATPLFF-LDYFATGALNKDVLLSVVQGITEGCKQAKITLVGGETAEMPGMYGNNHYDLAGFVVGVVDKSKILPNYGVMRAGDYIVGLESSGIHSNGFSLVRHIFEDLGISYNDLSPWDNQLWGEVLLKPTKIYVDSLLPIMSQVKGIAHITGGGLIDNVPRILPK-NLFADVDISSLEWPDIFLWLTKEGKVEKREMLRTFNCGIGMILIIDPENMQGVKNHFQK--LGEKIEIIGKLNEKYNPS--FNGVVS--------------------- |
| 2Z1U Chain:A ((7-343)) | TLLLDYGSGG---RASHRLISDL------------------FLRHFDNPILGTLNDAARLDLTGPLAMSTDSYTVDPIFFPGGD----IGTLAVHGTVNDVSMLGARPRYLSCGFILEEGLDMDILERVVASMGKAAREAGVFIVTGDTKVVPR-GACDKMFINTTGIGEILVDPAPSGDRA-RPGDAILISGSMGDHGLTILSQRQGLNFAADVCSDSASL-------------NRVVEKLVLEVGDIHVLRDPTRGGLATTLNEIAGQSQAVCHVLETAVPVRESVRNGCSFLGLDP---LYLANEGK-LICILPEERAEAALAVLREGPHGEHAARIGSVKSVGELGAARAGQVVMETALGGHRLLSMLEQLPRIC |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200228 for 2636 contacts (-76.0/contact) +
2D Compatibility (PS) -31612 + (NN) -2952 + (LL) 3188
1D Compatibility (HY) -4400 + (ID) 3100
Total energy: -239104.0 ( -90.71 by residue)
QMean score : 0.403
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