Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MKIVVLSGYGLNCEKETAFAF-VECGRKLGVNNIEVRIVHINE-IIKNPGELRLSNILAIPGGFSYGDDTGAGNAFALRVKNNLLDKFQEFLSQDKLVIGICNGCQILAKLIPEFSNLALIRNDIGNYQCRWIKVKVS-PQSSSVWLQDLNELYLPIAHGEGKFFMNQGVLDQLIENNSVALRYINESGDYANLQFPYNPNGSTYDLAALSDKSGRVLALMPHPERGIF-FTQQDNWPLEKEKCKRLKIAMPKY----------------GDGMLIFENALRYFC------------ |
| 1L9X Chain:A ((28-315)) | AKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGG-SVDLRRSDYAKVAKIFYNLSIQSFDD--GDYFPVWGTCLGFEELSLLISGE-----CLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWS--LSVKNFTMNEKLKKFFNVLTTNT----DGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNISSFQQCYIFD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1L9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -99187 for 2075 contacts (-47.8/contact) +
2D Compatibility (PS) -26761 + (NN) -10219 + (LL) 604
1D Compatibility (HY) -4400 + (ID) 1800
Total energy: -141763.0 ( -68.32 by residue)
QMean score : 0.195
|
|
|