Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQI----LIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
3C3I Chain:D ((6-131))
------------VKKLVESATTPMR--GSEGAAGYDISSV--EDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVL--AGVIDSDYRGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLD------LSDTAR----------
General information:
TITO was launched using:
RESULT:
Template:
3C3I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61201 for 773 contacts (-79.2/contact) +
2D Compatibility (PS) -13558 + (NN) -7474 + (LL) 1260
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -95023.0 ( -122.93 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_3C3I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3I-query.scw
PDB file :
Tito_Scwrl_3C3I.pdb
: