Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARNNPNIKLLYIRDLFAKECKEIEEYCILGKKQHIQISPEEGKLLSLFIKIHKVRSIVEIGTLYGYSSICMAKALPEYGHIYTIENNPKHFKIAKKNFNAFNMSNKITLIVGNALEKLAELSAKAPYDMIFIDADKAGYPKYLDWAESYIKQDGLIVADNTLLLNTVFLKSPPKEVLEKSWRAMREFNYRLSDEKKYCSILIPTDEGMTIALKLT
4OA5 Chain:A ((16-227))
SKQDEYLNKLFAVDTEGALKAHKTAP----SELRMAQLGTVEGQMLQLLIRMAGIHSIVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALAQLNTLKEMAPFDMIFIDANKSSYLAYLNWAKMYIRKGGLIVADNTFLFGSVFDEHPTEKVSSNAHASMRAFNDELANKEKYLSTIIPTSEGMMVSIKLT
General information:
TITO was launched using:
RESULT:
Template:
4OA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120593 for 1777 contacts (-67.9/contact) +
2D Compatibility (PS) -22886 + (NN) -7546 + (LL) 528
1D Compatibility (HY) -19600 + (ID) 4400
Total energy: -174497.0 ( -98.20 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_4OA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OA5-query.scw
PDB file :
Tito_Scwrl_4OA5.pdb
: