Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAIAIIDFGSQFTQLIARQIREMDVYCEIFPSNISFET--ISKFNGFILSGGPQSVHDGCSEASGVAHEIIKFNEATNVPILGICYGQQLICHYFGAKVKKEFKQEFCKTKIKILKESSIVKDVWNVNSEVDVLMNHADSVETAPQGFTVIASGVINQTIAIVANEQRRIYCTQFHPEVKPTANGSKLLSNFL-DIANCKRDWTMKSIIEKQKEKIKNVVGEKKVIAAVSGGVDSSVAVALTYKAVG-KQLNCIFIDTGLLRKNQTIAL-----LEEIPVNYVDKSNLFLSR----------LKGITDPEEKRKIIGNTFIEVFEEEAKKIGN----ADFLMQGTIYSDVVESGHA--SGNASTIKSHHNVGGLPEKM--NLKLVEPLRYLFKDEVRLLGKEIGLSNEIIFQHPFPGPGLAVRVIGEVDEERVRI------------------------LQEIDEIYINTMKNYDLY--DKIWQAFAVLLPIRTVGVMGDGRTYGYVCAL---------------------------------------------------------------------------------------------------------RAVTSFDGMTADAF----PFENKSQHSLIFWDFLQNVSSIIVNNVSGVNRVVYDLTSKPPATIEWE |
| 2VXO Chain:A ((30-697)) | -GAVVILDAG--YGKVIDRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGP---------APWFDPA-IF---TIGKPVLGICYGMQMMNKVFGGTVHK-------VFNISVDNTC---SLFRGLQKEEVVLLTHGDSVDKVADGFKVVARS-GN-IVAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTLPRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEM-NLKPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPHTLLQRVKACTTEEDQE-KLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDWESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIP---------VEVVLKMVTEI-KKIPGISRIMYDLTSKPPGTTEWE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237070 for 3564 contacts (-66.5/contact) +
2D Compatibility (PS) -50714 + (NN) -10102 + (LL) 2980
1D Compatibility (HY) -36800 + (ID) 9600
Total energy: -341306.0 ( -95.76 by residue)
QMean score : 0.424
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