Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHDKFDNVTFTINGTRESLFNFVFCEDQCTELSVQKTLDYLRARNIEATWVMNSHTKTQGILEKCGIKHVSTPKKVLLNMKNYFLPADVVPGLKLNAVTSSNLLKQLDSYTSKIFHHSIG----IVSTFFRGLSNYD-DKNSGLRFFLVTLNDEIIGTCGFYIQ------DSVAGFYSDGVLPIYRNRGIGTQMVLDRIKIIQQLECKHVVAHCM---KPSVNLYKRLGFQILGNLYLYTSSA |
| 3I9S Chain:A ((23-171)) | -------------------------------------------------------------------------------------------SVEIKRV-DKHHCLDLVGIFIELERYYFGDKAASEQDLANYLSHQVFSEHSGVKVIAAVEHDKVLGFATYTIMFPAPKLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIREKEYYRFEG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92782 for 884 contacts (-105.0/contact) +
2D Compatibility (PS) -14207 + (NN) -893 + (LL) 6472
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -104510.0 ( -118.22 by residue)
QMean score : 0.403
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