Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKSFILSTGSYLPKKKLGNDEIALMVETSDEWIRQRTGITQRYIADEAELTSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKNAFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDG------NVDVLCTKGGISSTGDSGKIYMNGREVFKHAVDKLTASIEETLRCNNLKITDIDWLVPHQANIRIIEAVVKKLNFLMEKVI-NTVDQHANTSAASIPLALDYAIQKPKIKPGSLGILVAIGAGLTWGSVLLRY |
2QNY Chain:B ((15-331)) | -----LLSVGAYRPERVVTNDEIC-----SDEWIYTRTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATM-LVVGTEKLSPTIDMYDRGNCFIFADGAAAVVVG---------ETPFQGIGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQFNSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235646 for 2787 contacts (-84.6/contact) +
2D Compatibility (PS) -31715 + (NN) -7145 + (LL) 1724
1D Compatibility (HY) -17600 + (ID) 5400
Total energy: -295782.0 ( -106.13 by residue)
QMean score : 0.455
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