Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFEQIKKDITENDVVLYMKGTSDFPQCGFSGLVVSILKKLNVKFKYINVLENDEIRQSIKKFSNWPTIPQLYIKGEFIGGCDITREIYEKGELQSLLKEKKIVE
2YAN Chain:A ((6-104))
--LEERLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKAYSNWPTYPQLYVKGELVGGLDIVKELKENGELLPILRGE----
General information:
TITO was launched using:
RESULT:
Template:
2YAN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70066 for 731 contacts (-95.8/contact) +
2D Compatibility (PS) -10896 + (NN) -4518 + (LL) 704
1D Compatibility (HY) -10400 + (ID) 2100
Total energy: -97276.0 ( -133.07 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_2YAN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YAN-query.scw
PDB file :
Tito_Scwrl_2YAN.pdb
: