Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRQSTKKALLIPFVIMIITAIVLMGVWFIFNSLIALIASIVLVVMIIVSIILFRQALMKMDSYVDGLSAQISTTNNKAIKHLPIGIIVLDENDHIEWVNQFMTNHM--EANVISESVNEVFPNILKQLDRVKSVEIEYNQ---YHFQVRYSENDHCLYFFDITEQVQTNELYENSKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRVISRWATEYNIFFKRYSSDQFVAYLNQKILADLEESKFDILSQLREKSVGYRAQLTLSIGVGEGTENLIDLGELSQSGLDLALGRGGDQVAIKSINGNVRFYGGKTDPMEKRTRVRARVISHALKDILAEGDKVIIMGHKRPDL-DAIGAAIGVSRFAMMNNLEAYIVLNETDIDPTLRRVMNEIDKKSELRERFITSDDAWDMMTSKTTVVIVDTHKPELVLDENVLNKANRKVVIDHHRRGESFISNPLLIYMEPYASSTAELVTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTLRTGSRTFDAASYLRAHGADTILTQHFLKDDVDTYINRSELIRTVKVEDNGIAIAHGSDDKIYHPVTVAQAADELLSLEGIE-----ASYVVARREDNLIGISARSLGSVNVQ--LTMEALGGGGHLTNAATQLK----GVTVEEAIAQLQQAITEQLSRSEDA |
| 4C3X Chain:A ((23-530)) | -------------------DWTSECDVLVVGSGGGALTGAYTAAAQGLTTIVLEKTDRFGGTSAYSGASIWLPGTQVQERAGLP---------DSTENARTYLRALLGDAESERQDAYVETAPAVVALLEQNPNIEFEFRAFPDYYKAEGRMDTGRSINPLDLD----PADIGDLAGKVRPELDQDRTG---QDHAPGPMIGGRALIGRLLAAVQSTGKAELRT-------------------ESVLTSLIVEDGRVVGAEVES------------------------------GGETQRIKANRGVLMAAGGIEGNAEMREQAGTP------------GKAIWSMGPFGANTGDAISAGIAVGG--------ATALLDQAWFCPGVEQ-----------------PDGSAAFMVGVRGGLVVDSAGERYLNESLPYDQFGRA--MDAHDDNGSAVPSFMIFDSREGGGLPAICI-------PNTAPAKHLEA--------------------GTWVGADTLEELAAKTGLPADALRSTVEKFNDAAKL---------GVDEEFHRGEDPYDAFFCPPNGGANAALTAIENGPFYAARIVLSDLGTKGGLVTDVNGRVLRADGSAIDGLYAAGNTSASLSGRFYPGPGVPLGTAMVFSYRAAQDMAK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C3X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155509 for 4655 contacts (-33.4/contact) +
2D Compatibility (PS) -50656 + (NN) -3934 + (LL) 14180
1D Compatibility (HY) -2000 + (ID) 4350
Total energy: -202269.0 ( -43.45 by residue)
QMean score : 0.179
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