Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------MSRLIRM---SVLASG---STGNATFVENEK--------GSLLVDVGLTGKKMEELFSQIDRNIQDLNGI---LVTHEHIDHIKGLGVLARKYQ-------LPIYANEKTWQAIEKK--------DSRIPMDQKFIFN-----PYETKSIAGFDVESFNVSH-------DAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRM------CRYPWKTKQRILGDMGHVSNEDAGHAMTDVITG-NTKR------IYLSHLSQDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDTDKAIPTPIYTI-- |
4OJV Chain:A ((1-369)) | MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGDDELVPSFYEHDREPIEFFIDSKLNIQKGLSKSLLQSLKRQGEHFESA-NTMKKTYEVFQGITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTAERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCIIVCGDVEQDRRESEESLLEEFWSYVAENIPLVHLKGILVECSCPLSSKPEQL--YGHLSPIYLINELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRD-PRLTILEELRFLAEERN----LGDLRISIALEGHTLFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36614 for 1736 contacts (-21.1/contact) +
2D Compatibility (PS) -26683 + (NN) -709 + (LL) 596
1D Compatibility (HY) -16800 + (ID) 2800
Total energy: -83010.0 ( -47.82 by residue)
QMean score : 0.273
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