Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQLLNDTLSAWLL--IESLSPGEVNFTAEDILSAEHFKNG-AKQAQ-LQSFDEYFE--IW-N------------------SERFI-------ISEEKSETGELIFKFYRHCFRYN---EINLKIQDIFDDYSDIH---------NPNGTHCYGYT-F-N--TDKHGKVIVDSIHIPMIMSALKEIEKN-KNANIEEKFNDS--VEKFFQKVKEILADEPINEFKL-KKMDKAYDEYFSVL-NSKKDGLFGHYVAIEYVKDSDLPQPEFNSFFISDIEKARKSPNQTL-IDYIEGVEESQR----IEVDE-NKEMFDKFLHPSRLPDGRWPSQTEFRLSLMQQLAVNQITSGNERISSVNGPPGTGKTTLLKDIFAHLVVERGKELAKLNNPKDAFVK--TKIHETDDKYVYLLKE-SIAKYKMVVASSNNGAVENISKD----LPKIEEIIRNPEKCKFPKYEQNYANLAH--ELKDFAEIAEDLIGE-SAW-----GLFSGVFGK-STNINQVLSHMLKQDANDIGF-----AKLLQNENNRMSYNELMSEWQSHQRAFLEELR--------------HVEMLKEESIRAYDVYK-NCESFSKIEQVINSEKTSIEEQVYHLDNETLRD-NKEIE----DLDNRINYI-VKQIE--TLNELIKSIKES-NKGFI--NKLKAMFNSEEDESYKDHNK-EKQ----QLLTQQLELEKCKKNKHEDLVSKLKEKEKLIKQLTKVQLQLDELNSQLQELEAYRIESKITIPEKDFWSDN-NYDERQVTNLWTS-DE----------LQYRRAMLFLRAMILHK------LLLIANNTTIYYAINDF-K---DRRKLI-------DANPDKVHNAWNVMHLIFPVVSTTFASFKSMYG--GIPKD------FIDYLFI-------DEAGQAIPQAAVGALYR---------------------SKK-VVAVGDPIQIEPVVTLESHL--IDNIRKNYHVPEYLVSKEASVQS-VADNA--NQYGFWKSD-----------ATDSNQKTWIGIPLWVH-------RRCL----KPMFTIANQI-AYNNKMV-LPSNITKVGKTG------------------WYDVK----GNAVQKQFVKEHGEKVVGLLADDWIEAIKE----GKNEPSSF-----------------------------VISPFSAVQQQIKRMLKQQLPTRIDIERTKINQWVDKSIGTVHTFQGKEAQKVYFVIGTDNTQDGAVNWSCEKPNLLNVAVTRAKKEFYVIGDMQRIQ----MKPFYETI--------------------------FKERNVK--------------------- |
| 4PJ3 Chain:A ((1-1363)) | NAEFVTQLACKYWAPHIKKKSPFDIK-VIEDIYEKEIVKSRFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWEIFKKKPDHFPFFFKHILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQLARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSEPVTMDKVH--YCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEV------DTRESLVKFFGPLS--SNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKL-----NLQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVTINLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGMLDDKGRVIEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLSIEHLKASFPGHNVKVTVEDPAL--QIPPFRITFPVEAKTLI-VEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNPDVTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPN-------KVTTVDRFQGQ--QNDYILLSLVRTR--AVGHLRDVRRL--VVASRARLGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTTRKNGERPSHEVQIIKNPQANFVYNYHLIQTTHHYHQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 303611 for 6793 contacts (44.7/contact) +
2D Compatibility (PS) -100479 + (NN) 23583 + (LL) 2616
1D Compatibility (HY) 32000 + (ID) 3250
Total energy: 258081.0 ( 37.99 by residue)
QMean score : -0.020
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