Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MRIVQPVIEQLKAQSHPVCHYIYDLVGLEHHLQHITSSLPSNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKGLAFK-PANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRVNLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNLHVDVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQ--EMEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHG-AWYAILRGGTQQFRLPVSWQHNHPFEIYRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISHHDFLSHPHPEFIYLTQTKEDE----- |
| 7ODC Chain:A ((2-418)) | SSFTKDEFDCHILDEGFTAKDILDQKINDKDA--FYVADLGDILKKHLRWLKALP-RVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARA-------------------HPKAKLVLRIAT-KFGATLKTSRLLLERAKE-LNIDVIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVG-FSMHLLDIGGGFPGSE---DTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKTVWEQTFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDE------KYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAAS-TFNGFQRPNIYYVMS--RPMWQLMK |
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General information:
TITO was launched using:
| RESULT:
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Template: 7ODC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203236 for 3044 contacts (-66.8/contact) +
2D Compatibility (PS) -38677 + (NN) -13832 + (LL) 2940
1D Compatibility (HY) -15200 + (ID) 3900
Total energy: -271905.0 ( -89.32 by residue)
QMean score : 0.494
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