Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIVITGAKGFVGKNLKADLTST-TDHHIFEVHRQTKE-----------------EELESAL--LKADFIVHLAGVNRPE---HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----------------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNY---NSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT--IENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV |
| 2YY7 Chain:A ((3-262)) | PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAM-SFTPTEIANEIKKHIPE------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93707 for 1654 contacts (-56.7/contact) +
2D Compatibility (PS) -23505 + (NN) -12089 + (LL) 8228
1D Compatibility (HY) -8400 + (ID) 2250
Total energy: -131723.0 ( -79.64 by residue)
QMean score : 0.515
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