Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQL----PGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
1ZDR Chain:B ((2-160))
--ISHIVAMDENRVIGKDNRLPWHLPADLAYFKRVTMGHAIVMGRKTFEAIGRPLPGRDNVVVTGNRSFRPEGCLVLHSLEEVKQWIASRADEVFIIGGAELFRATMPIVDRLYVTKIFASFPGDTFYPPISDDEWEIVSYTPGGKDEKNPYEHAFIIYER--
General information:
TITO was launched using:
RESULT:
Template:
1ZDR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108340 for 1136 contacts (-95.4/contact) +
2D Compatibility (PS) -16275 + (NN) -3325 + (LL) 388
1D Compatibility (HY) -15200 + (ID) 3850
Total energy: -146602.0 ( -129.05 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_1ZDR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZDR-query.scw
PDB file :
Tito_Scwrl_1ZDR.pdb
: